Table 1 Datasets summary of RNA-seq and ChIP-seq

RNA-seq^a

 Normal

695 up/518 down

616 up/344 down

1016 up/783 down

 H₂O₂ stress

630 up/712 down

318 up/369 down

324 up/ 311 down

 Menadione stress

/

346 up/508 down

830 up/954 down

ChIP-seq

 Normal

340

1109

43

 H₂O₂ stress

40

926

36

 Menadione stress

/

285

56

Direct targets genes (In both RNA-seq and ChIP-seq datasets)

 Normal

41 up/19 down

94 up/39 down

8 up/2 down

 H₂O₂ stress

6 up

84 up/62 down

5 up/2 down

 Menadione stress

/

10 up/54 down

10 up/4 down

Additional information

 Putative binding site sequence

BGGYGRCGGHGGCGG

CKYCGBSGYCG

CCYCSSYRAC

 Binding site verified (EMSA)

CatA (BBA_06186), BbOsrR2 (BBA_04239), BbClp1 (BBA_07582)

Msg5 (BBA_09275), hypothetical protein gene (BBA_06338), Mcm1 (BBA_06763)

Fus3 (BBA_01244), hypothetical protein gene (BBA_06338)