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Table 4 Transposon classification.

From: Complete reannotation of the Arabidopsis genome: methods, tools, protocols and the final release

Transposable element classification

# Annotated genomic regions

Class I (Retrotransposons)

1652

gypsy-like retrotransposon family (Athila)

511

gypsy-like retrotransposon family

374

copia-like retrotransposon family

494

non-LTR retrotransposon family (LINE)

264

other

9

Class II (DNA transposons)

703

hAT-like transposase family (hobo/Ac/Tam3)

77

CACTA-like transposase family (En/Spm)

69

CACTA-like transposase family (Ptta/En/Spm)

127

CACTA-like transposase family (Tnp1/En/Spm)

37

CACTA-like transposase family (Tnp2/En/Spm)

102

Mutator-like transposase family

268

Mariner-like transposase family

9

other

14