From: Complete reannotation of the Arabidopsis genome: methods, tools, protocols and the final release
Transposable element classification | # Annotated genomic regions |
---|---|
Class I (Retrotransposons) | 1652 |
gypsy-like retrotransposon family (Athila) | 511 |
gypsy-like retrotransposon family | 374 |
copia-like retrotransposon family | 494 |
non-LTR retrotransposon family (LINE) | 264 |
other | 9 |
Class II (DNA transposons) | 703 |
hAT-like transposase family (hobo/Ac/Tam3) | 77 |
CACTA-like transposase family (En/Spm) | 69 |
CACTA-like transposase family (Ptta/En/Spm) | 127 |
CACTA-like transposase family (Tnp1/En/Spm) | 37 |
CACTA-like transposase family (Tnp2/En/Spm) | 102 |
Mutator-like transposase family | 268 |
Mariner-like transposase family | 9 |
other | 14 |