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Table 3 PEP-CTERM domain abundance in environmental metagenome datasets

From: Exopolysaccharide-associated protein sorting in environmental organisms: the PEP-CTERM/EpsH system. Application of a novel phylogenetic profiling heuristic

ID

Environmental source

Size (MB)

# PEP-CTERM

Relative abundancea

13694

Sargasso sea: planktonic (filtered) marine

670

2

0.01

13696

Iron Mountain, CA: acid mine drainage biofilm

10

1

0.4

 

Yellowstone hot spring microbial mats

168

150

4

13700

Whale Fall Community: microbial mat & rib bone

9

18

8

13699

Waseca County, MN: clay loam surface farm soil

12

84

29

  1. a Data was normalized to results from the Comprehensive Microbial Resource which showed 256 hits from a database size of 1048 MB of DNA.