From: Multiple, non-allelic, intein-coding sequences in eukaryotic RNA polymerase genes
Accession | Sequences producing significant alignments | E value |
---|---|---|
Fungi | Â | Â |
   gb DQ302778.1 | Entomophthora muscae AFTOL-ID28, RPB2 | 4 × 10-9 |
   gb DQ521419.1 | Auricularia auricula-judae AFTOL-ID1681 | 7 × 10-9 |
   gb DQ234553.1 | Hydnum albomagnum AFTOL-ID 471, RPB2 | 1 × 10-8 |
   gb AY485624.1 | Hydnum repandum RPB2 | 1 × 10-8 |
   gb DQ302787.1 | Umbelopsis ramanniana AFTOL-ID 144, RPB2 | 2 × 10-8 |
Metazoa | Â | Â |
   gb XM_793194.1 | Strongylocentrotus purpuratus LOC593725 | 5 × 10-7 |
   dbj AK114672.1 | Ciona intestinalis cDNA, clone:cieg010h22 | 1 × 10-6 |
   gb AC007441.9 | Drosophila melanogaster clone BACR10E03 | 2 × 10-6 |
   gb BT028050.1 | Gasterosteus aculeatus clone CNB114-G10 | 2 × 10-6 |
   gb U10333.1 | Caenorhabditis elegans RNA polymerase II | 2 × 10-6 |
Plantae | Â | Â |
   emb AJ565937.1 | MGU565937 Mimulus guttatus partial RPB2 | 9 × 10-7 |
   gb DQ029103.1 | Spirogyra sp. UWCC FW670 RPB2 | 1 × 10-6 |
   gb AF020844.1 | Marchantia polymorpha RPB140 (RPB2) | 1 × 10-6 |
   gb AY596718.1 | Tetralocularia pennelii (RPB2) | 1 × 10-6 |
   gb AY563264.1 | Selaginella densa RNA polymerase II (RPB2) | 1 × 10-6 |
   emb AJ566358.1 | GSP566358 Gardenia sp. Oxelman 2319 (RPB2) | 1 × 10-6 |
Archaea | Â | Â |
   gb AE010299.1 | Methanosarcina acetivorans str. C2A (rpoB) | 2 × 10-6 |
   gb AE008384.1 | Methanosarcina mazei strain Goe1 (rpoB) | 2 × 10-6 |
   gb CP000099.1 | Methanosarcina barkeri str. fusaro | 3 × 10-6 |
   gb AE000782.1 | Archaeoglobus fulgidus DSM 4304 (rpoB1) | 4 × 10-6 |
   emb BX957222.1 | Methanococcus maripaludis S2 | 5 × 10-6 |
   emb X14818.1 | Sulfolobus acidocaldarius rpoB | 9 × 10-6 |
Viruses | Â | Â |
   gb AF389451.1 | Tiger frog virus, complete genome | 2 × 10-4 |
   gb AY548484.1 | Frog virus 3, complete genome | 4 × 10-4 |
   gb AY666015.1 | Grouper iridovirus, complete genome | 0.001 |
   gb AY150217.1 | Ambystoma tigrinum stebbensi virus | 0.001 |
   gb AF397202.1 | Regina ranavirus clone PstI-3.8 | 0.001 |
   gb AY653733.1 | Acanthamoeba polyphaga Mimivirus | 0.001 |
   emb AJ890364.1 | Emiliania huxleyi virus 86 isolate Ehv86 | 0.003 |
Eubacteria | Â | Â |
 | No significant similarity found. |  |