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Table 3 Green algal and land plant chloroplast genomes examined in this study

From: A clade uniting the green algae Mesostigma viride and Chlorokybus atmophyticus represents the deepest branch of the Streptophyta in chloroplast genome-based phylogenies

Green alga/land plant

Size (bp)

IR size (bp)

Genes (no.) a

Introns (no.) b

GenBank accession no.

Charophyceae

     

Chara vulgaris

184,933

10,919

127

2/16

GenBank:NC_008097

Chaetosphaeridium globosum

131,183

12,431

125

1/17

GenBank:NC_004115

Chlorokybus atmophyticus

152,254

7,640

138

1/0

GenBank:DQ422812

Mesostigma viride

118,360

6,057

137

0

GenBank:NC_002186

Staurastrum punctulatum

157,089

-

121

1/7

GenBank:NC_008116

Zygnema circumcarinatum

165,372

-

125

1/12

GenBank:NC_008117

Land Plants

     

Acorus calamus

153,821

25,697

110

1/20

GenBank:NC_007407

Amborella trichopoda

162,686

26,651

111

1/20

GenBank:NC_005086

Anthoceros formosae

161,162

15,744

120

2/20

GenBank:NC_004543

Arabidopsis thaliana

154,478

26,264

110

1/20

GenBank:NC_000932

Atropa belladonna

156,687

17,031

111

1/20

GenBank:NC_004561

Calycanthus floridus

153,337

23,296

111

1/20

GenBank:NC_004993

Cucumis sativus

155,293

24,753

111

1/20

GenBank:NC_007144

Eucalyptus globulus

160,286

26393

109

1/20

GenBank:NC_008115

Huperzia lucidula

154,373

15,314

119

1/20

GenBank:NC_006861

Lactuca sativa

152,765

25,033

111

1/20

GenBank:NC_007578

Lotus japonicus

150,519

25,156

109

1/20

GenBank:NC_002694

Marchantia polymorpha

121,024

10,058

120

1/19

GenBank:NC_001319

Nicotiana tabacum

155,939

25,341

110

1/20

GenBank:NC_001879

Nymphaea alba

159,930

25,177

111

1/20

GenBank:NC_006050

Oenothera elata

163,935

27,807

109

1/18

GenBank:NC_002693

Oryza sativa

134,525

20,799

108

1/17

GenBank:NC_001320

Panax ginseng

156,318

26,071

111

1/20

GenBank:NC_006290

Phalaenopsis aphrodite

148,964

23,787

99

1/18

GenBank:NC_007499

Physcomitrella patens

122,890

9,589

116

1/20

GenBank:NC_005087

Pinus thunbergii

119,707

-

106

1/15

GenBank:NC_001631

Saccharum officinarum

141,182

22795

108

1/17

GenBank:NC_006084

Spinacia oleracea

150,725

25,073

110

1/19

GenBank:NC_002202

Triticum aestivum

134,545

20,703

108

1/17

GenBank:NC_002762

Zea mays

140,384

22,748

108

1/17

GenBank:NC_001666

Prasinophyceae

     

Nephroselmis olivacea

200,799

46,137

128

0

GenBank:NC_000927

Trebouxiophyceae

     

Chlorella vulgaris

150,613

-

112

3/0

GenBank:NC_001865

Ulvophyceae

     

Oltmannsiellopsis viridis

151,933

18,510

104

5/0

GenBank:NC_008099

Pseudendoclonium akinetum

195,867

6,039

105

27/0

GenBank:NC_008114

Chlorophyceae

     

Chlamydomonas reinhardtii

203,827

22,211

94

5/2

GenBank:NC_005353

Scenedesmus obliquus

161,452

12,022

96

7/2

GenBank:NC_008101

Stigeoclonium helveticum

223,902

-

97

16/5

GenBank:DQ630521

  1. a Genes present in the IR were counted only once. Pseudogenes, unique ORFs and intron ORFs were not taken into account.
  2. b Numbers of group I and group II introns are given before and after the slash, respectively.