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Table 4 The list of cuticle associated proteins down-regulated in post-moult stage (Cy3) crabs when compared against crabs in the intermoult (Cy5)

From: Gene expression profiling of cuticular proteins across the moult cycle of the crab Portunus pelagicus

Transcript Ids (Accession no.)

Gene IDs (BLAST results)

Score (bits)

E value

*M

*t

*P value

*Adjusted P value

PpCRYP1 (GenBank: EF102021)

AF091261 Cancer magister cryptocyanin (CC1) mRNA

517

2e-143

-5.519

-17.319

0

0.002

    

-5.366

-19.323

0

0.002

 

ABB59714 cryptocyanin 2 C. magister

572

8e-162

-5.16

-20.243

0

0.002

    

-4.971

-18.46

0

0.002

    

-4.966

-12.183

0

0.003

    

-4.948

-11.536

0

0.003

    

-4.885

-19.268

0

0.002

    

-4.841

-16.889

0

0.002

    

-4.821

-17.521

0

0.002

    

-4.817

-17.824

0

0.002

    

-4.79

-18.98

0

0.002

    

-4.787

-15.616

0

0.002

    

-4.785

-17.019

0

0.002

    

-4.785

-17.095

0

0.002

    

-4.572

-17.015

0

0.002

    

-4.493

-15.838

0

0.002

    

-4.392

-14.665

0

0.002

    

-4.183

-7.188

0.001

0.015

    

-3.427

-8.404

0

0.009

PpCRYP2 (GenBank: EF102022)

DQ230982 C. magister cryptocyanin 2 (Cc2) AAD09762 cryptocyanin C. magister

157

7e-35

-5.153

-17.813

0

0.002

  

226

8e-68

-4.759

-14.431

0

0.002

PpCUT10 (GenBank: EF102002)

P81585 CUPC6 Cuticle protein CP434 (CPCP434) C. pagurus

76.6

3e-13

-3.626

-11.234

0

0.004

PpCUT9 (GenBank: EF102001)

P81580 CUPC1 Cuticle protein CP1158 (CPCP1158) C. pagurus

100

5e-20

-3.176

-11.079

0

0.004

PpCUT7 (GenBank: EF101999)

P81580 CUPC1 Cuticle protein CP1158 (CPCP1158) C. pagurus

80.9

7e-14

-2.865

-8.21

0

0.01

PpCUT8 (GenBank: EF102000)

P81580 CUPC1 Cuticle protein CP1158 (CPCP1158) C. pagurus

142

2e-32

-2.556

-9.073

0

0.007

  1. M = log 2 fold change in expression, t = t-statistic, and the P value = t-distribution. The adjusted P values were calculated using the false discovery rate (FDR) procedure. Negative values of M and t indicate down-regulation in the Cy3 sample (* multiple values for the same transcript indicate expression levels for different cDNA probes on the microarray that make up a contig).