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Table 1 List of analyzed genomes.

From: Recombination and insertion events involving the botulinum neurotoxin complex genes in Clostridium botulinum types A, B, E and F and Clostridium butyricumtype E strains

Species

Subtype1

Strain

Group

Locus tag ID2

Genbank accession3

Toxin complex

BoNT location5

C. botulinum

A1

ATCC 3502

I

CBO

AM412317/AM412318

HA-A1

chr/oppA

C. botulinum

A1

ATCC 19397

I

CLB

CP000726

HA-A1

chr/oppA

C. botulinum

A1

Hall

I

CLC

CP000727

HA-A1

chr/opp

C. botulinum

A1(B)

NCTC 2916

I

CBN

ABDO02000001-49

orfX-A1, HA-(B)

chr/arsC, chr/oppA

C. botulinum

A2

Kyoto-F

I

CLM

CP001581

orfX-A2

chr/arsC

C. botulinum

A3

Loch Maree

I

CLK

CP000962/CP000963

orfX-A3

plasmid

C. botulinum

Ba4

Strain 657

I

CLJ

CP001083/CP001081/CP001082

orfX-A4, HA-bvB

plasmid

C. botulinum

B1

Okra

I

CLD

CP000939/CP000940

HA-B1

plasmid

C. botulinum

Bf

-----

I

CBB

ABDP01000001-70

HA-bvB, orfX-F

plasmid

C. botulinum

prot F

Langeland

I

CLI

CP000728/CP000729

orfX-F

chr/arsC

C. botulinum

npB

Eklund 17B

II

CLL

CP001056/CP001057

HA-npB

plasmid6

C. botulinum

E1

Beluga

II

CLO

ACSC01000001-16

orfX-E1

chr/rarA

C. botulinum

E3

Alaska E43

II

CLH

CP001078

orfX-E3

chr/rarA

C. butyricum

E4

BL 5262

II

CLP

ACOM01000001-13

orfX-E4

chr/rarA

C. tetani

tetanus

E88

-

CTC

NC 004557/NC 004565

p21-NT

Plasmid

C. sporogenes

N/A

ATCC 15579

I

CLOSPO

ABKW02000001-4

N/A

N/A

  1. 1Subtype designations as listed in Hill et al, 2007
  2. 2Locus tag ID designations listed in GenBank and Hill et al, 2007
  3. 3Accessions listed as chromosome/plasmid
  4. 4orfX = orfX1, orfX2, orfX3; HA = HA17, HA33, HA70 accessory proteins
  5. 5Location: chr = chromosome, oppA = oppA/brnQ operon, arsC = arsC operon, rarA = rarA operon; plasmid = plasmid
  6. 6Plasmid does not share homology with Group I plasmids