Table 2 Summary of variable and parsimony informative sites in data partitions.
Treatment | Aligned length | Pines only Variable positions (% of total) | PI positions (% of total) | Pines and outgroups Variable positions (% of total) | PI positions (% of total) |
|---|---|---|---|---|---|
All Nucleotides | 132085 | 11179 (8.5) | 7761 (5.9) | 22834 (17.3) | 11534 (8.7) |
All Nucleotides without ycf1, ycf2 | 118935 | 8755 (7.4) | 5852 (4.9) | 18978 (16.0) | 9038 (7.6) |
Exon Nucleotides | 62298 | 4716 (7.6) | 3475 (5.6) | 8346 (13.4) | 4867 (7.8) |
Exon Nucleotides without ycf1, ycf2 | 49044 | 2291 (4.7) | 1566 (3.2) | 4489 (9.2) | 2381 (4.9) |
ycf1 | 6355 | 1514 (23.8) | 1227 (19.3) | 2165 (34.1) | 1507 (23.7) |
ycf2 | 6794 | 910 (13.4) | 682 (10.0) | 1686 (24.8) | 987 (14.5) |
ycf1+ycf2 | 13149 | 2424 (18.4) | 1909 (14.5) | 3851 (29.3) | 2494 (19.0) |
Wang et al. [22] | 3513 | 196 (5.6) | 127 (3.6) | 482 (13.5) | 243 (6.8) |
Gernandt et al. [21] | 2817 | 197 (7.0) | 128 (4.5) | 345 (12.2) | 167 (5.9) |
Eckert and Hall [20] | 3288 | 217 (6.6) | 123 (3.7) | 411 (12.5) | 206 (6.3) |