From: 2R and remodeling of vertebrate signal transduction engine
Tetrapoda and younger (5,495 gene set linked) | Â | Â | Â |
Subnetwork and overlap | Outdegree | Indegree | Betweenness |
All edges (237 nodes) | 3.90 [4.07, 342] | 3.61 [4.07, 99] | 0.41 [0.47, 266] |
Positive edges only (150 nodes) | 2.27 [2.15, 676] | 1.98 [2.16, 262] | 0.40 [0.44, 365] |
Negative edges only (71 nodes) | 1.70 [1.34, 905] | 1.22 [1.33, 338] | 0.39 [0.42, 440] |
Scaffolding only (144 nodes) | 3.57 [3.71, 386] | 3.57 [3.70, 385] | 0.43 [0.47, 369] |
2ROs (9,958 gene set linked) | Â | Â | Â |
Subnetwork and overlap | Outdegree | Indegree | Betweenness |
All edges (1,096 nodes) | 4.34 [4.06, 999] | 4.29 [4.06, 984] | 2.33 [2.19, 916] |
Positive edges only (771 nodes) | 2.23 [2.16, 836] | 2.19 [2.16, 666] | 2.40 [2.25, 879] |
Negative edges only (377 nodes) | 1.48 [1.33, 996] | 1.34 [1.33, 522] | 2.63 [2.30, 981] |
Scaffolds only (714 nodes) | 3.85 [3.72, 898] | 3.85 [3.72, 885] | 2.40 [2.35, 626] |
Chordata (2,173 gene set linked) | Â | Â | Â |
Subnetwork and overlap | Outdegree | Indegree | Betweenness |
All edges (194 nodes) | 4.24 [4.04, 697] | 4.26 [4.06, 697] | 0.44 [0.38, 792] |
Positive edges only (120 nodes) | 2.59 [2.14, 932] | 2.31 [2.15, 707] | 0.47 [0.35, 909] |
Negative edges only (61 nodes) | 1.55 [1.33, 789] | 1.95 [1.33, 983] | 0.42 [0.36, 730] |
Scaffolds only (141 nodes) | 3.40 [3.70, 203] | 3.40 [3.70, 216] | 0.44 [0.47, 455] |
Bilateria (5,223 gene set linked) | Â | Â | Â |
Subnetwork and overlap | Outdegree | Indegree | Betweenness |
All edges (620 nodes) | 4.87 [4.06, 1000] | 4.72 [4.05, 1000] | 1.60 [1.23, 1000] |
Positive edges only (428 nodes) | 2.61 [2.16, 999] | 2.49 [2.15, 997] | 1.65 [1.24, 999] |
Negative edges only (242 nodes) | 1.66 [1.33, 998] | 1.49 [1.34, 903] | 1.92 [1.48, 995] |
Scaffolds only (399 nodes) | 4.19 [3.73, 987] | 4.19 [3.72, 990] | 1.45 [1.31, 801] |