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Table 1 Vector list of cloned regions used in constructs

From: Expression of leukemia inhibitory factor in Müller glia cells is regulated by a redox-dependent mRNA stability mechanism

Vector name

Lif 3′UTR position (1 to 3180)

Length of 3′UTR (bp)

AREs

Sequence source

Cloning method

∆UTR

0

0

0

NA

RE

Whole Lif 3′UTR

1 to 3180

3180

11

mus musculus

PCR/RE

hgen DNA

NA

3142

2

homo sapiens

PCR/RE

AU-rich R I

1 to 570

570

4

mus musculus

PCR/RE

AU-rich R II

2556 to 3180

625

5

mus musculus

RE

hACTB 3′UTR

NA

600

3

homo sapiens

PCR/RE

R27 (wt)

2999 to 3180

182

3

mus musculus

RE

R32

2805 to 2998

194

0

mus musculus

PCR/RE

R31

2541 to 2812

272

2

mus musculus

PCR/RE

R38

2079 to 2245

167

0

mus musculus

PCR/RE

R36 (wt)

1062 to 1231

170

2

mus musculus

PCR/RE

R35

398 to 570

173

4

mus musculus

PCR/RE

R37

62 to 229

168

0

mus musculus

PCR/RE

R27-A

2999 to 3180

182

1

mus musculus

SD

R27-B

2999 to 3180

182

1

mus musculus

RE/AN

R27-C

2999 to 3180

182

1

mus musculus

SD

R27-No

2999 to 3180

182

0

mus musculus

SD

R36-DE

1062 to 1231

170

2

mus musculus

SD

R36-D

1062 to 1231

170

1

mus musculus

SD

R36-E

1062 to 1231

170

1

mus musculus

SD

R36-No

1062 to 1231

170

0

mus musculus

SD

R27 2 ARE

2999 to 3180

182

2

mus musculus

SD

R27 4 ARE

2999 to 3180

237

4

mus musculus

SD

R27 9 ARE

2999 to 3180

351

9

mus musculus

SD

  1. Name and details of position, length, number of putative AREs, and cloning strategies are listed for individual 3′UTR sequences used in the luciferase experiments. AREs, AU-rich elements; hgen, human genomic DNA; NA, not applicable; PCR, polymerase chain reaction; RE, restriction digestion; RE/AN, restriction digestion/primer annealing; SD, site-directed mutagenesis.