Table 3 Relative expression of putative differentially expressed predicted gene models in R35 ovaries relative to m115 and m134 ovaries as determined by qRT-PCR

augustus-D18g-s1064104.g619280

SDE3-related

nd

0.02 (0.13)

nd

0.34 (0.24)

augustus-D18g-s14661.g22078

Aluminium-induced protein

nd

0.34 (0.13)

nd

nd

augustus-D18g-s179972.g197694

EXORDIUM-related (HpEXO-like)

8.15 (0.53)^a

6.00 (0.61)^a

7.19 (1.85)^a

4.66 (0.47)^a

augustus-D18g-s204206.g212029

DUF584

nd

nd

nd

0.33 (0.11)

augustus-D18g-s221502.g225572

Glucan synthase-like

nd

0.04 (0.08)

nd

0.01 (0.08)

augustus-D18g-s227925.g234365

Cytochrome P450

nd

nd

5.79 (0.98)^a

4.74 (1.33)^a

augustus-D18g-s228894.g235636

S/T protein kinase

nd

−0.20 (0.35)

nd

−0.41 (0.12)

augustus-D18g-s250182.g259844

NRPD1B-related

nd

0.00 (0.14)

nd

0.66 (0.06)

augustus-D18g-s255108.g264963

Lipoxygenase (HpLOX2)

2.87 (0.37)^a

2.40 (0.42)^a

2.75 (1.92)^a

1.94 (0.59)^a

augustus-D18g-s276058.g281382

Nuclear matrix protein

nd

nd

nd

−0.03 (0.15)

augustus-D18g-s335972.g331650

Laccase

5.10 (0.30)^a

2.84 (0.22)^a

4.97 (0.50)^a

4.06 (0.34)^a

augustus-D18g-s33935.g43705

DCL4-related

nd

−0.04 (0.13)

nd

−0.12 (0.13)

augustus-D18g-s341112.g335498

LOB domain

1.83 (0.16)^a

1.68 (0.23)^a

1.99 (0.47)^a

2.40 (0.10)^a

augustus-D18g-s541698.g482507

Pentatricopeptide

−2.64 (0.28)^a

−3.08 (0.21)^a

−2.52 (0.45)^a

−2.69 (0.09)^a

augustus-D18g-s562621.g490922

DCL2-related

nd

−0.19 (0.46)

nd

0.15 (0.09)

augustus-D18g-s569078.g495478

CBS domain

nd

nd

nd

0.38 (0.08)

augustus-D18g-s573721.g500128

TIR-2 TMV R

19.61 (0.05)^a

15.73 (3.55)^a

19.74 (0.42)^a

18.34 (1.83)^a

augustus-D18g-s636193.g536033

Cinnamic acid-dihydrodiol

nd

−0.14 (1.6)

nd

nd

augustus-D18g-s724133.g556087

Alcohol dehydrogenase

1.87 (0.56)^a

1.94 (0.41)^a

nd

nd

augustus-D18g-s742950.g560669

Myrosinase binding

4.45 (0.75)^a

5.44 (0.77)^a

nd

nd

augustus-D18g-s766362.g567064

Metal ion binding protein

nd

0.28 (0.16)

nd

nd

augustus-D18g-s857898.g586359

DUF674

nd

nd

5.04 (0.46)^a

5.11 (0.08)^a