TF interactions within datasets | ||||
TF | Number of interactions | PMID | HT methodology | Reference |
ArcA | 143 | 24699140 | ChIP-chip | [30] |
ArgR | 426 | 22082910 | ChIP-chip | [29] |
ArgR | 38 | 25735747 | ChIP-exo | [28] |
AscG | 9 | 19633077 | gSELEX | [37] |
BasR | 99 | 22442305 | gSELEX | [38] |
CitB | 15 | 18997424 | gSELEX | [39] |
Cra | 14 | 16115199 | gSELEX | [40] |
Cra | 234 | 21115656 | gSELEX | [41] |
CRP | 39 | 16301522 | ChIP-chip | [42] |
CsgD | 31 | 21421764 | gSELEX | [43] |
CsiR | 126 | 28061857 | ChIP-seq | [16] |
Dan | 176 | 20156994 | gSELEX | [44] |
DpiA | 15 | 18997424 | gSELEX | [39] |
Fis | 228 | 16963779 | ChIP-chip | [45] |
FNR | 137 | 17164287 | ChIP-chip | [46] |
FNR | 796 | 23818864 | ChIP-seq and ChIp-chip | [31] |
FNR | 186 | 24699140 | ChIP-chip | [30] |
Fur | 473 | 26670385 | ChIP-seq | [33] |
Fur | 91 | 25222563 | ChIP-exo | [32] |
H-NS | 1501 | 23818864 | ChIP-chip | [31] |
H-NS | 101 | 16963779 | ChIP-chip | [45] |
H-NS | 53 | 21097887 | ChIP-seq | [47] |
IHF | 1020 | 23818864 | ChIP-chip | [31] |
IHF | 155 | 16963779 | ChIP-chip | [45] |
LeuO | 17 | 19429622 | gSELEX | [48] |
LexA | 69 | 16264194 | ChIP-chip | [49] |
Lrp | 67 | 19052235 | ChIP-chip | [34] |
Lrp | 296 | 28348809 | gSELEX | [50] |
Nac | 537 | 28061857 | ChIP-seq | [16] |
NemR | 6 | 18567656 | gSELEX | [51] |
NsrR | 83 | 19656291 | ChIP-chip | [52] |
OmpR | 68 | 28061857 | ChIP-seq | [16] |
OmpR | 30 | 28526842 | ChIP-exo | [36] |
OmpR | 31 | 26332955 | gSELEX | [35] |
PdhR | 14 | 17513468 | gSELEX | [53] |
PgrR | 82 | 23301696 | gSELEX | [54] |
RcdA | 39 | 23233451 | gSELEX | [55] |
RstA | 34 | 17468243 | gSELEX | [56] |
RutR | 20 | 18515344 | ChIP-chip | [57] |
RutR | 9 | 17919280 | gSELEX | [58] |
SdiA | 212 | 24645791 | gSELEX | [59] |
SutR | 15 | 25406449 | gSELEX | [60] |
TrpR | 17 | 22082910 | ChIP-chip | [29] |
UvrY | 288 | 26673755 | CHIP-exo | [61] |
Sigma factors and Rho interactions within datasets | ||||
Sigma factors and Rho | Number of interactions | PMID | HT methodology | Reference |
RpoD (Sigma70) | 1214 | 16109958 | ChIP-chip | [62] |
RpoD (Sigma70) | 528 | 16301522 | ChIP-chip | [42] |
Rho | 260 | 19706412 | ChIP-chip | [63] |
RpoD (Sigma70) | 6350 | 23818864 | ChiP-seq | [31] |
RpoH (Sigma32) | 82 | 16892065 | ChIP-chip | [64] |
RpoH (Sigma32) | 44 | 20602746 | ChIP-chip | [65] |
RpoS (Sigma38) | 91 | 26020590 | ChiP-seq | [66] |