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Table 2 Functional pathway differences identified in the KAAS analysis

From: On the reversibility of parasitism: adaptation to a free-living lifestyle via gene acquisitions in the diplomonad Trepomonas sp. PC1

 

Trepomonas a

S. salmonicida a

G. intestinalis a

Carbohydrate metabolism

60 (74)

52 (66)

33 (34)

Energy metabolism

35 (43)

36 (44)

27 (29)

Lipid metabolism

28 (44)

19 (24)

14 (16)

Nucleotide metabolism

62 (75)

48 (57)

47 (51)

Amino acid metabolism

33 (40)

29 (41)

15 (16)

Metabolism of other amino acids

15 (19)

12 (15)

6 (6)

Glycan biosynthesis and metabolism

8 (8)

8 (9)

11 (11)

Metabolism of cofactors and vitamins

28 (35)

23 (29)

15 (17)

Metabolism of terpenoids and polyketides

5 (6)

5 (5)

13 (13)

Biosynthesis of other secondary metabolites

8 (10)

3 (7)

2 (2)

Xenobiotics biodegradation and metabolism

15 (19)

9 (10)

7 (7)

Transport and catabolism

65 (93)

52 (71)

49 (60)

Transcription

35 (39)

29 (30)

52 (55)

Membrane transport

9 (9)

4 (4)

3 (3)

Signal transduction

77 (95)

62 (78)

58 (65)

Cellular communication

24 (28)

19 (28)

17 (23)

  1. aNumber of distinct KEGG Orthology and number of enzymes in parenthesis