Table 1 Assembly statistics for genomes of mikrocytids (Mikrocytos mackini and Paramikrocytos canceri) and other available rhizarians
From: Contrasting outcomes of genome reduction in mikrocytids and microsporidians
Mikrocytos mackini (parasite) | Paramikrocytos canceri (parasite) | Plasmodiophora brassicae (parasite) | Bigelowiella natans (free-living) | Reticulomyxa filosa (free-living) | |
|---|---|---|---|---|---|
Assembly size (Mbp) | 49.7 | 12.7 | 24.0 | 94.7 | 101.9 |
No. contigs | 16,018 | 3,113 | 165 | 302 | 50,809 |
N50 | 4547 | 6806 | 472,887 | 819,951 | 3609 |
Max. contig length (bp) | 76,988 | 40,223 | 1,189,627 | 3,030,241 | 48,547 |
GC content | 33.60% | 30.06% | 59.40% | 44.90% | 35.00% |
No. of protein-coding genes | 14,372 | 8201 | 9,913 | 22,320 | 40,160 |
Reference | This paper | [26] | [31] | [32] | [33] |