Skip to main content

Table 1 The five chromosome-level assemblies used as a base for creation of pangenome references for the domestic chicken

From: A pangenome graph reference of 30 chicken genomes allows genotyping of large and complex structural variants

ID

Assembled bird

Accession

Ref

Contig N50 (Mb)

Contig count

bGalGal1b

Commercial broiler

GCA_016699485.1

[33]

18.8

677

bGalGal1w

White leghorn layer

GCA_016700215.2

[33]

17.7

685

bGalGal4

Ross broiler

GCA_027557775.1

N/A

5.47

812

bGalGal5

Cobb broiler

GCA_027408225.1

N/A

8.33

712

Huxu

Huxu broiler

GCA_024206055.1

[34]

91.3

54

Back to article page

BMC Biology

ISSN: 1741-7007

Contact us