Table 1 Ovarian genes that appear dependent on ERβ for their in vivo expression
From: Ovarian ERβ cistrome and transcriptome reveal chromatin interaction with LRH-1
Gene | Gene name | log2FC | ERβKO (FPKM) | WT (FPKM) | ERβ-binding site |
|---|---|---|---|---|---|
Bhmt | betaine-homocysteine methyltransferase | -6,7 | 0,3 | 34,0 | Intergenic |
Mmel1 | membrane metallo-endopeptidase-like 1 | -5,1 | 0,3 | 9,1 | - |
Ssu2 | ssu-2 homolog (C. elegans) | -4,2 | 0,3 | 6,2 | - |
Slc38a3 | solute carrier family 38, member 3 | -3,2 | 1,0 | 10,1 | Intron 1 |
Lrp8 | low density lipoprotein receptor-related protein 8, apolipoprotein e receptor | -3,1 | 1,5 | 13,4 | Intron 1 |
Them5 | thioesterase superfamily member 5 | -2,3 | 0,4 | 2,2 | - |
Cabp1 | calcium binding protein 1 | -1,9 | 0,9 | 4,2 | Intron 1 |
Tspan11 | tetraspanin 11 | -1,9 | 0,9 | 3,1 | Intron 2 |
Lrp11 | low density lipoprotein receptor-related protein 11 | -1,6 | 1,9 | 5,8 | Intron 1 |
Abca7 | ATP-binding cassette, sub-family A (ABC1), member 7 | -1,6 | 1,6 | 4,9 | Exon |
Stx11 | syntaxin 11 | -1,4 | 1,3 | 3,4 | - |
Adrb2 | adrenergic receptor, beta 2 | -1,3 | 1,3 | 3,0 | - |
Ctnna2 | catenin (cadherin associated protein), alpha 2 | -1,2 | 1,0 | 2,2 | Intron 1 |
Nipal1 | NIPA-like domain containing 1 | -1,1 | 1,2 | 2,6 | - |